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Khaleque, H. N., González, C., Kaksonen, A. H., Boxall, N. J., Holmes, D. S., Watkin, E. L. Genome-based classification of two halotolerant extreme acidophiles, Acidihalobacter prosperus V6 (= DSM 14174= JCM 32253) and 'Acidihalobacter ferrooxidans' V8 (= DSM 14175= JCM 32254) as two new species, Acidihalobacter aeolianus sp. nov. and Acidihalobacter ferrooxydans sp. nov., respectively. International journal of systematic and evolutionary microbiology, 69(6), 1557-1565. DOI: 10.1099/ijsem.0.003313 (2019).
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Jorquera, R., González, C., Clausen, P., Petersen, B., Holmes, D. S. Improved ontology for eukaryotic single-exon coding sequences in biological databases. Database, 2018. DOI: 10.1093/database/bay089 (2018).
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Issotta, F., Covarrubias, P. C., Moya-Beltrán, A., Bellenberg, S., Thyssen, C., Sand, W., Nuñez, H., Mena, C., Holmes, D.S., Quatrini, R., Vera Véliz, M. 16S rRNA and multilocus phylogenetic analysis of the iron oxidizing acidophiles of the acidiferrobacteraceae family. In Solid State Phenomena (Vol. 262, pp. 339-343). Trans Tech Publications Ltd. DOI:10.4028/www.scientific.net/SSP.262.339 (2017).
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Castro, M., Moya-Beltrán, A., Covarrubias, P. C., Gonzalez, M., Cardenas, J. P., Issotta, F., Salgado, O. A., Acuña, L. G., Encina, G., Holmes, D. S., Johnson, D. B. Draft genome sequence of the type strain of the sulfur-oxidizing acidophile, Acidithiobacillus albertensis (DSM 14366). Standards in genomic sciences, 12(1), 77. DOI: 10.1186/s40793-017-0282-y (2017).
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Quatrini, R., Escudero, L. V., Moya-Beltrán, A., Galleguillos, P. A., Issotta, F., Acosta, M., Cárdenas, J. P., Nuñez, H., Holmes, D. S., Demergasso, C. Draft genome sequence of Acidithiobacillus thiooxidans CLST isolated from the acidic hypersaline Gorbea salt flat in northern Chile. Standards in Genomic Sciences, 12(1), 84. DOI: 10.1186/s40793-017-0305-8 (2017).
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Valdebenito‐Maturana, B., Reyes‐Suarez, J. A., Henriquez, J., Holmes, D. S., Quatrini, R., Pohl, E., & Arenas‐Salinas, M. Mutantelec: An In Silico mutation simulation platform for comparative electrostatic potential profiling of proteins. Journal of Computational Chemistry, 38(7), 467-474. DOI: 10.1002/jcc.24712 (2017).
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Vidal P., Pacheco R. The Cross-Talk Between the Dopaminergic and the Immune System Involved in Schizophrenia. Front Pharmacol. 11: 394. doi: 10.3389/fphar.2020.00394 (2020).
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Vidal P., Pacheco R. Targeting the dopaminergic system in autoimmunity. J Neuroimmune Pharmacol. 15(1): 57-73. doi: 10.1007/s11481-019-09834-5 (2020).
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Comi C, Cosentino M, Pacheco R. Editorial: Peripheral Immunity in Parkinson's Disease: Emerging Role and Novel Target for Therapeutics. Front Neurol. 10(1): 1080. doi: 10.3389/fneur.2019.01080 (2019)
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Prado C, Ugalde V, González H, Figueroa A, López E, Lladser A, Pacheco R. STAT3 activation in combination with NF-kappaB inhibition induce tolerogenic dendritic cells with high therapeutic potential to attenuate collagen-induced arthritis. J Immunol Res. 1982570. doi: /10.1155/2019/1982570 (2019).
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Pacheco R. Cross-talk between T-cells and gut-microbiota in neurodegenerative disorders. Neural Regen Res. 14(12):2091-2092. doi: 10.4103/1673-5374.262582 (2019).
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Araos P, Prado C, Lozano M, Figueroa S, Espinoza A, Berger T, Mak TW, Jaisser F, Pacheco R, Michea L, Amador CA. Dendritic cells are crucial for cardiovascular remodeling and modulate Neutrophil Gelatinase-Associated Lipocalin (NGAL) expression upon mineralocorticoid receptor activation. J Hypertens. 37(7): 1482-1492. doi: 10.1097/HJH.0000000000002067 (2019).
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Campos-Acuña J, Elgueta D, Pacheco R. T-cell-driven inflammation as a mediator of the gut-brain axis involved in Parkinson’s disease. Front Immunol. 10(1): 239. doi: 10.3389/fimmu.2019.00239 (2019).
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Medel B, Costoya C, Fernandez D, Pereda C, Lladser A, Sauma D, Pacheco R, Iwawaki T, Salazar-Onfray F, Osorio F. IRE1α activation in Bone Marrow-Derived Dendritic Cells Modulates Innate Recognition of Melanoma Cells and Favors CD8+ T cell Priming. Front Immunol. 9(1): 3050. doi: 10.3389/fimmu.2018.03050 (2019).
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Pardo-Esté C, Hidalgo A.A., Aguirre C., Briones A.C., Cabezas C.E., Castro-Severyn J., Fuentes J.A., Opazo C.M., Riedel C.A., Otero C., Pacheco R., Valvano M.A., Saavedra C.P. The ArcAB two-component regulatory system promotes resistance to reactive oxygen species and systemic infection by Salmonella Typhimurium. PLoS One. 13(9):e0203497. doi: 10.1371/journal.pone.0203497 (2018).
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